Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap2Q8K389 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap2Q8K389 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Gm13464-201ENSMUST00000119418 935 ntBASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Gm17837-201ENSMUST00000186435 985 ntBASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Gm42466-201ENSMUST00000202099 1301 ntBASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Mir7684-201ENSMUST00000183858 60 ntBASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap2Q8K389 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Cdk5rap2Q8K389 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cdk5rap2Q8K389 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Gm25144-201ENSMUST00000179561 110 ntBASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Gm25352-201ENSMUST00000179815 110 ntBASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Gm38225-201ENSMUST00000194001 393 ntBASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Gm7775-201ENSMUST00000218871 853 ntBASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Gm10313-201ENSMUST00000095320 1002 ntBASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap2Q8K389 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Gm27533-201ENSMUST00000183800 152 ntBASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Gm18049-201ENSMUST00000208909 581 ntBASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Mxra8os-201ENSMUST00000097740 687 ntBASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 AC159621.2-201ENSMUST00000223519 1326 ntBASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Gm8242-201ENSMUST00000193029 1420 ntBASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 AC125206.2-201ENSMUST00000217454 574 ntBASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 CT025535.1-201ENSMUST00000227172 491 ntBASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Gm2423-201ENSMUST00000074863 733 ntBASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap2Q8K389 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms