Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.97■□□□□ 0.63
Smc4Q8CG47 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc4Q8CG47 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Gm25911-201ENSMUST00000157621 56 ntBASIC18.96■□□□□ 0.63
Smc4Q8CG47 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.96■□□□□ 0.63
Smc4Q8CG47 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smc4Q8CG47 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Gm4995-201ENSMUST00000117247 432 ntBASIC18.95■□□□□ 0.62
Smc4Q8CG47 Gm13597-201ENSMUST00000121239 375 ntBASIC18.95■□□□□ 0.62
Smc4Q8CG47 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.95■□□□□ 0.62
Smc4Q8CG47 Gm14822-201ENSMUST00000122247 291 ntBASIC18.95■□□□□ 0.62
Smc4Q8CG47 Gm10499-201ENSMUST00000174094 934 ntBASIC18.95■□□□□ 0.62
Smc4Q8CG47 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc4Q8CG47 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Gm27301-201ENSMUST00000184012 127 ntBASIC18.94■□□□□ 0.62
Smc4Q8CG47 Gm43575-201ENSMUST00000196420 516 ntBASIC18.94■□□□□ 0.62
Smc4Q8CG47 Gm44492-201ENSMUST00000197012 141 ntBASIC18.94■□□□□ 0.62
Smc4Q8CG47 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc4Q8CG47 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc4Q8CG47 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smc4Q8CG47 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc4Q8CG47 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc4Q8CG47 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc4Q8CG47 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.93■□□□□ 0.62
Smc4Q8CG47 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.93■□□□□ 0.62
Smc4Q8CG47 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.93■□□□□ 0.62
Smc4Q8CG47 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms