Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.09■□□□□ 0.65
Smc5Q8CG46 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.09■□□□□ 0.65
Smc5Q8CG46 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc5Q8CG46 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc5Q8CG46 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smc5Q8CG46 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc5Q8CG46 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc5Q8CG46 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc5Q8CG46 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Gm27742-201ENSMUST00000184667 60 ntBASIC19.08■□□□□ 0.64
Smc5Q8CG46 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smc5Q8CG46 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Fbxl12-205ENSMUST00000140702 1555 ntBASIC19.07■□□□□ 0.64
Smc5Q8CG46 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Gm6659-201ENSMUST00000174752 547 ntBASIC19.07■□□□□ 0.64
Smc5Q8CG46 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smc5Q8CG46 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Gm25745-201ENSMUST00000174945 133 ntBASIC19.06■□□□□ 0.64
Smc5Q8CG46 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.06■□□□□ 0.64
Smc5Q8CG46 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.06■□□□□ 0.64
Smc5Q8CG46 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.06■□□□□ 0.64
Smc5Q8CG46 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smc5Q8CG46 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Gm12134-201ENSMUST00000122109 520 ntBASIC19.05■□□□□ 0.64
Smc5Q8CG46 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms