Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc60Q8C4J0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Gm11764-201ENSMUST00000120221 623 ntBASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Gm18733-201ENSMUST00000173950 856 ntBASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ccdc60Q8C4J0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Gm18489-201ENSMUST00000172565 551 ntBASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Gm9682-201ENSMUST00000197505 556 ntBASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Gm45167-201ENSMUST00000208007 322 ntBASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc60Q8C4J0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc60Q8C4J0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Gm27628-201ENSMUST00000184911 107 ntBASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc60Q8C4J0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms