Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf3Q8C120 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf3Q8C120 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 BC037039-201ENSMUST00000192003 2205 ntBASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Gm11780-201ENSMUST00000136880 516 ntBASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Gm19164-201ENSMUST00000210667 640 ntBASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf3Q8C120 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Gm13418-201ENSMUST00000119097 944 ntBASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf3Q8C120 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms