Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm6736-201ENSMUST00000166583 948 ntBASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm8318-201ENSMUST00000182954 872 ntBASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdk5rap1Q8BTW8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm24513-201ENSMUST00000174964 138 ntBASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm27397-201ENSMUST00000184997 107 ntBASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdk5rap1Q8BTW8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms