Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim50Q810I2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Gm13418-201ENSMUST00000119097 944 ntBASIC15.03■□□□□ -0
Trim50Q810I2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.03■□□□□ -0
Trim50Q810I2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.03■□□□□ -0
Trim50Q810I2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.03■□□□□ -0
Trim50Q810I2 Gm6296-201ENSMUST00000222599 943 ntBASIC15.03■□□□□ -0
Trim50Q810I2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim50Q810I2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim50Q810I2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim50Q810I2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trim50Q810I2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim50Q810I2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Trim50Q810I2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.02■□□□□ -0
Trim50Q810I2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim50Q810I2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.02■□□□□ -0
Trim50Q810I2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Trim50Q810I2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.02■□□□□ -0
Trim50Q810I2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.02■□□□□ -0
Trim50Q810I2 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.02■□□□□ -0
Trim50Q810I2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim50Q810I2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.02□□□□□ -0.01
Trim50Q810I2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim50Q810I2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim50Q810I2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim50Q810I2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.01□□□□□ -0.01
Trim50Q810I2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Gm27646-201ENSMUST00000183989 110 ntBASIC15.01□□□□□ -0.01
Trim50Q810I2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim50Q810I2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim50Q810I2 Grk6-207ENSMUST00000225925 2769 ntBASIC15.01□□□□□ -0.01
Trim50Q810I2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trim50Q810I2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim50Q810I2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim50Q810I2 Gm42901-201ENSMUST00000197735 3171 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms