Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Gm12490-201ENSMUST00000120255 560 ntBASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Gm9794-201ENSMUST00000202370 423 ntBASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rpap1Q80TE0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Gm44344-201ENSMUST00000200287 129 ntBASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Gm3365-201ENSMUST00000216296 1480 ntBASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpap1Q80TE0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpap1Q80TE0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Gm6539-201ENSMUST00000119157 1064 ntBASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Gm15321-201ENSMUST00000121290 288 ntBASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Rpap1Q80TE0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC23.64■■□□□ 1.38
Rpap1Q80TE0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rpap1Q80TE0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Rpap1Q80TE0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rpap1Q80TE0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rpap1Q80TE0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms