Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.21□□□□□ -0.13
Pif1Q80SX8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.21□□□□□ -0.13
Pif1Q80SX8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pif1Q80SX8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pif1Q80SX8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.21□□□□□ -0.14
Pif1Q80SX8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pif1Q80SX8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pif1Q80SX8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gm13597-201ENSMUST00000121239 375 ntBASIC14.2□□□□□ -0.14
Pif1Q80SX8 Mir1895-201ENSMUST00000122615 79 ntBASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.2□□□□□ -0.14
Pif1Q80SX8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.2□□□□□ -0.14
Pif1Q80SX8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gm8396-201ENSMUST00000057361 823 ntBASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pif1Q80SX8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.19□□□□□ -0.14
Pif1Q80SX8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Gm27494-201ENSMUST00000184735 189 ntBASIC14.19□□□□□ -0.14
Pif1Q80SX8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pif1Q80SX8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.18□□□□□ -0.14
Pif1Q80SX8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Grk6-207ENSMUST00000225925 2769 ntBASIC14.18□□□□□ -0.14
Pif1Q80SX8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms