Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim12Q78RX3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim12Q78RX3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim12Q78RX3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Gm25016-201ENSMUST00000158399 131 ntBASIC12.97□□□□□ -0.33
Smim12Q78RX3 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.97□□□□□ -0.33
Smim12Q78RX3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.97□□□□□ -0.33
Smim12Q78RX3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Smim12Q78RX3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.96□□□□□ -0.33
Smim12Q78RX3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smim12Q78RX3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.96□□□□□ -0.34
Smim12Q78RX3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smim12Q78RX3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Gm15794-201ENSMUST00000120182 631 ntBASIC12.95□□□□□ -0.34
Smim12Q78RX3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.95□□□□□ -0.34
Smim12Q78RX3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smim12Q78RX3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim12Q78RX3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Smim12Q78RX3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smim12Q78RX3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms