Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup98Q6PFD9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup98Q6PFD9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Gm27680-201ENSMUST00000184192 160 ntBASIC17.96■□□□□ 0.47
Nup98Q6PFD9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nup98Q6PFD9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.96■□□□□ 0.47
Nup98Q6PFD9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nup98Q6PFD9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nup98Q6PFD9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Nup98Q6PFD9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nup98Q6PFD9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.94■□□□□ 0.46
Nup98Q6PFD9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms