Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.12■□□□□ 0.33
Trim37Q6PCX9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim37Q6PCX9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.11■□□□□ 0.33
Trim37Q6PCX9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim37Q6PCX9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim37Q6PCX9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Mir1895-201ENSMUST00000122615 79 ntBASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Gm43767-201ENSMUST00000198933 381 ntBASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trim37Q6PCX9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim37Q6PCX9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Gm27494-201ENSMUST00000184735 189 ntBASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.08■□□□□ 0.32
Trim37Q6PCX9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim37Q6PCX9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms