Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Gm18195-201ENSMUST00000207604 706 ntBASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.63■□□□□ 0.09
Casc4Q6P2L7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Gm15173-201ENSMUST00000122049 433 ntBASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Gm11780-201ENSMUST00000136880 516 ntBASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Mzt1-203ENSMUST00000227948 952 ntBASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Casc4Q6P2L7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Gm25990-201ENSMUST00000102440 86 ntBASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Casc4Q6P2L7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Gm7862-201ENSMUST00000121461 292 ntBASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Casc4Q6P2L7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms