Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rtl3Q6P1Y1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rtl3Q6P1Y1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtl3Q6P1Y1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Dancr-204ENSMUST00000132389 2347 ntBASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Gm27702-201ENSMUST00000184512 56 ntBASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtl3Q6P1Y1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Gm11764-201ENSMUST00000120221 623 ntBASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms