Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp140Q6NSQ5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Gm8655-201ENSMUST00000221159 852 ntBASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sp140Q6NSQ5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Gm8344-201ENSMUST00000119813 856 ntBASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Gm28033-201ENSMUST00000184224 96 ntBASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Gm21362-201ENSMUST00000194272 928 ntBASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp140Q6NSQ5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.1
Sp140Q6NSQ5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sp140Q6NSQ5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms