Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Gm27742-201ENSMUST00000184667 60 ntBASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Gm8784-201ENSMUST00000222096 1435 ntBASIC15□□□□□ -0.01
Pcdhga7Q6DD96 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga7Q6DD96 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Rprl3-201ENSMUST00000157400 290 ntBASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga7Q6DD96 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Gm44454-201ENSMUST00000198541 138 ntBASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhga7Q6DD96 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga7Q6DD96 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhga7Q6DD96 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga7Q6DD96 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga7Q6DD96 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga7Q6DD96 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhga7Q6DD96 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms