Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
Gli3Q61602 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC20.57■□□□□ 0.88
Gli3Q61602 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC20.57■□□□□ 0.88
Gli3Q61602 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Gm27631-201ENSMUST00000184163 466 ntBASIC20.57■□□□□ 0.88
Gli3Q61602 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gli3Q61602 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Gli3Q61602 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC20.57■□□□□ 0.88
Gli3Q61602 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gli3Q61602 Gm23931-201ENSMUST00000103842 109 ntBASIC20.56■□□□□ 0.88
Gli3Q61602 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Gli3Q61602 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC20.56■□□□□ 0.88
Gli3Q61602 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Gli3Q61602 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Gm18222-201ENSMUST00000202416 1387 ntBASIC20.56■□□□□ 0.88
Gli3Q61602 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gli3Q61602 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Gli3Q61602 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Gli3Q61602 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Gm6244-201ENSMUST00000178732 841 ntBASIC20.55■□□□□ 0.88
Gli3Q61602 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC20.55■□□□□ 0.88
Gli3Q61602 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gli3Q61602 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC20.55■□□□□ 0.88
Gli3Q61602 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gli3Q61602 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gli3Q61602 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Rarb-207ENSMUST00000225921 2756 ntBASIC20.54■□□□□ 0.88
Gli3Q61602 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.54■□□□□ 0.88
Gli3Q61602 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gli3Q61602 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC20.54■□□□□ 0.88
Gli3Q61602 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.54■□□□□ 0.88
Gli3Q61602 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC20.54■□□□□ 0.88
Gli3Q61602 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
Gli3Q61602 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gli3Q61602 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gli3Q61602 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gli3Q61602 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gli3Q61602 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Gli3Q61602 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Gm15236-201ENSMUST00000117309 379 ntBASIC20.53■□□□□ 0.88
Gli3Q61602 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Mir7654-201ENSMUST00000185082 70 ntBASIC20.53■□□□□ 0.88
Gli3Q61602 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.53■□□□□ 0.88
Gli3Q61602 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC20.53■□□□□ 0.88
Gli3Q61602 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.53■□□□□ 0.88
Gli3Q61602 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gli3Q61602 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gli3Q61602 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms