Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Foxc1Q61572 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Gm25745-201ENSMUST00000174945 133 ntBASIC11.35□□□□□ -0.59
Foxc1Q61572 Gm18206-201ENSMUST00000207027 926 ntBASIC11.35□□□□□ -0.59
Foxc1Q61572 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Foxc1Q61572 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Foxc1Q61572 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Foxc1Q61572 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Foxc1Q61572 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.34□□□□□ -0.59
Foxc1Q61572 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.34□□□□□ -0.59
Foxc1Q61572 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC11.34□□□□□ -0.59
Foxc1Q61572 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.34□□□□□ -0.59
Foxc1Q61572 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Gm5867-201ENSMUST00000063197 592 ntBASIC11.34□□□□□ -0.59
Foxc1Q61572 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Foxc1Q61572 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.34□□□□□ -0.59
Foxc1Q61572 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.34□□□□□ -0.59
Foxc1Q61572 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Foxc1Q61572 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Foxc1Q61572 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Foxc1Q61572 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Foxc1Q61572 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms