Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.51■□□□□ 0.55
Mre11Q61216 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.51■□□□□ 0.55
Mre11Q61216 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Mre11Q61216 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Mre11Q61216 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Mre11Q61216 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.51■□□□□ 0.55
Mre11Q61216 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Mre11Q61216 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.5■□□□□ 0.55
Mre11Q61216 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Mre11Q61216 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Mre11Q61216 Gm19891-201ENSMUST00000189771 303 ntBASIC18.5■□□□□ 0.55
Mre11Q61216 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.5■□□□□ 0.55
Mre11Q61216 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Mre11Q61216 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mre11Q61216 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Mre11Q61216 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.49■□□□□ 0.55
Mre11Q61216 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.49■□□□□ 0.55
Mre11Q61216 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC18.49■□□□□ 0.55
Mre11Q61216 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Mre11Q61216 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Gm13168-201ENSMUST00000121771 632 ntBASIC18.49■□□□□ 0.55
Mre11Q61216 Gm23547-201ENSMUST00000158210 271 ntBASIC18.49■□□□□ 0.55
Mre11Q61216 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.49■□□□□ 0.55
Mre11Q61216 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.49■□□□□ 0.55
Mre11Q61216 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Mre11Q61216 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Mre11Q61216 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mre11Q61216 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Mre11Q61216 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Mre11Q61216 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Gm11336-201ENSMUST00000118168 334 ntBASIC18.48■□□□□ 0.55
Mre11Q61216 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.48■□□□□ 0.55
Mre11Q61216 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Mre11Q61216 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.48■□□□□ 0.55
Mre11Q61216 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Mre11Q61216 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mre11Q61216 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.47■□□□□ 0.55
Mre11Q61216 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Mre11Q61216 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.47■□□□□ 0.55
Mre11Q61216 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.47■□□□□ 0.55
Mre11Q61216 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mre11Q61216 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Mre11Q61216 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms