Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Ptch1Q61115 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC21.97■■□□□ 1.11
Ptch1Q61115 Gm7556-201ENSMUST00000201178 1084 ntBASIC21.97■■□□□ 1.11
Ptch1Q61115 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptch1Q61115 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC21.96■■□□□ 1.11
Ptch1Q61115 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
Ptch1Q61115 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Ptch1Q61115 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Gm15653-201ENSMUST00000119247 907 ntBASIC21.96■■□□□ 1.11
Ptch1Q61115 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Ptch1Q61115 Gm21854-201ENSMUST00000179901 471 ntBASIC21.96■■□□□ 1.11
Ptch1Q61115 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptch1Q61115 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.95■■□□□ 1.1
Ptch1Q61115 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC21.95■■□□□ 1.1
Ptch1Q61115 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC21.95■■□□□ 1.1
Ptch1Q61115 AY702102-202ENSMUST00000194651 1173 ntBASIC21.95■■□□□ 1.1
Ptch1Q61115 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC21.95■■□□□ 1.1
Ptch1Q61115 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ptch1Q61115 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptch1Q61115 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptch1Q61115 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC21.94■■□□□ 1.1
Ptch1Q61115 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptch1Q61115 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ptch1Q61115 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Ptch1Q61115 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptch1Q61115 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC21.94■■□□□ 1.1
Ptch1Q61115 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC21.94■■□□□ 1.1
Ptch1Q61115 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptch1Q61115 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm29310-201ENSMUST00000185468 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21825-201ENSMUST00000185728 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm29109-201ENSMUST00000185895 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21896-201ENSMUST00000186520 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21873-201ENSMUST00000186728 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21794-201ENSMUST00000187056 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21880-201ENSMUST00000187275 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21826-201ENSMUST00000187451 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21198-201ENSMUST00000188393 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21749-201ENSMUST00000189343 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21901-201ENSMUST00000189568 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm29424-201ENSMUST00000189716 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm28599-201ENSMUST00000189838 694 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21867-201ENSMUST00000189917 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm29269-201ENSMUST00000190087 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21722-201ENSMUST00000190153 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm28423-201ENSMUST00000190701 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21899-201ENSMUST00000190745 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21910-201ENSMUST00000191163 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21849-201ENSMUST00000191571 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm28678-201ENSMUST00000191593 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm20910-201ENSMUST00000193268 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm10766-202ENSMUST00000194123 606 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Gm21871-201ENSMUST00000194621 696 ntBASIC21.94■■□□□ 1.1
Ptch1Q61115 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Ptch1Q61115 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Ptch1Q61115 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC21.93■■□□□ 1.1
Ptch1Q61115 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC21.93■■□□□ 1.1
Ptch1Q61115 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 AC159006.1-201ENSMUST00000226396 258 ntBASIC21.93■■□□□ 1.1
Ptch1Q61115 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC21.93■■□□□ 1.1
Ptch1Q61115 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ptch1Q61115 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptch1Q61115 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ptch1Q61115 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptch1Q61115 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ptch1Q61115 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC21.92■■□□□ 1.1
Ptch1Q61115 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ptch1Q61115 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptch1Q61115 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptch1Q61115 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms