Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Gm15173-201ENSMUST00000122049 433 ntBASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Gm7230-201ENSMUST00000173026 815 ntBASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atp13a4Q5XF90 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atp13a4Q5XF90 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Gm27741-201ENSMUST00000185060 237 ntBASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp13a4Q5XF90 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Atp13a4Q5XF90 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Atp13a4Q5XF90 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Gm8318-201ENSMUST00000182954 872 ntBASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Gm10060-201ENSMUST00000212002 111 ntBASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp13a4Q5XF90 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Gm6550-201ENSMUST00000187574 993 ntBASIC16.63■□□□□ 0.25
Atp13a4Q5XF90 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms