Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shroom1Q5SX79 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shroom1Q5SX79 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shroom1Q5SX79 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Gm26308-201ENSMUST00000157768 69 ntBASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shroom1Q5SX79 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms