Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Gm6659-201ENSMUST00000174752 547 ntBASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 AA414768-201ENSMUST00000121924 1257 ntBASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Gm23634-201ENSMUST00000175071 91 ntBASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav8d-1Q5R1H8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Phf7-203ENSMUST00000226565 1971 ntBASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav8d-1Q5R1H8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms