Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Gm21854-201ENSMUST00000179901 471 ntBASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps13aQ5H8C4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Gm12957-201ENSMUST00000117835 377 ntBASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Gm37424-201ENSMUST00000191727 561 ntBASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps13aQ5H8C4 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Gm42693-201ENSMUST00000196779 631 ntBASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Gm15678-201ENSMUST00000117573 960 ntBASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
Vps13aQ5H8C4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Gm5566-201ENSMUST00000116118 459 ntBASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Gm4875-201ENSMUST00000118257 786 ntBASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps13aQ5H8C4 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Gm5035-201ENSMUST00000215581 927 ntBASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms