Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Gm27628-201ENSMUST00000184911 107 ntBASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Gm7787-201ENSMUST00000216858 688 ntBASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Gm15590-201ENSMUST00000078419 552 ntBASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ckap2Q3V1H1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ckap2Q3V1H1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ckap2Q3V1H1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Gm18733-201ENSMUST00000173950 856 ntBASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ckap2Q3V1H1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Celf4-206ENSMUST00000224553 1729 ntBASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ckap2Q3V1H1 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms