Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp48Q3V0C5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Usp48Q3V0C5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp48Q3V0C5 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Gm36967-201ENSMUST00000193814 266 ntBASIC19.04■□□□□ 0.64
Usp48Q3V0C5 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp48Q3V0C5 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.03■□□□□ 0.64
Usp48Q3V0C5 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp48Q3V0C5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp48Q3V0C5 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms