Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Mir8117-201ENSMUST00000184773 107 ntBASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gm17968-201ENSMUST00000194902 784 ntBASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gm43575-201ENSMUST00000196420 516 ntBASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Naf1Q3UMQ8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Gm23935-201ENSMUST00000102303 57 ntBASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Gm24270-201ENSMUST00000102326 57 ntBASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Gm14822-201ENSMUST00000122247 291 ntBASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Gm24245-201ENSMUST00000157318 57 ntBASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Naf1Q3UMQ8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Naf1Q3UMQ8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Naf1Q3UMQ8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Naf1Q3UMQ8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.64■□□□□ 0.1
Naf1Q3UMQ8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Naf1Q3UMQ8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Naf1Q3UMQ8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.64■□□□□ 0.09
Naf1Q3UMQ8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Naf1Q3UMQ8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Naf1Q3UMQ8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Naf1Q3UMQ8 Gm24513-201ENSMUST00000174964 138 ntBASIC15.64■□□□□ 0.09
Naf1Q3UMQ8 Gm27397-201ENSMUST00000184997 107 ntBASIC15.64■□□□□ 0.09
Naf1Q3UMQ8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms