Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fndc4Q3TR08 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fndc4Q3TR08 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.21□□□□□ -0.3
Fndc4Q3TR08 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fndc4Q3TR08 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Gm6623-201ENSMUST00000173570 544 ntBASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Fndc4Q3TR08 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Gm7977-201ENSMUST00000193787 748 ntBASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fndc4Q3TR08 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fndc4Q3TR08 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms