Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Gm25745-201ENSMUST00000174945 133 ntBASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Gm7977-201ENSMUST00000193787 748 ntBASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc13Q3TIR1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trappc13Q3TIR1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Gm14722-201ENSMUST00000118943 689 ntBASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Gm7284-201ENSMUST00000131667 944 ntBASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Gm33142-201ENSMUST00000193913 867 ntBASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Gm19164-201ENSMUST00000210667 640 ntBASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc13Q3TIR1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Gm27867-201ENSMUST00000184778 125 ntBASIC14.36□□□□□ -0.11
Trappc13Q3TIR1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms