Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smarcc1P97496 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smarcc1P97496 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.23■□□□□ 0.67
Smarcc1P97496 Gm2810-201ENSMUST00000118681 990 ntBASIC19.23■□□□□ 0.67
Smarcc1P97496 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.23■□□□□ 0.67
Smarcc1P97496 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Smarcc1P97496 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.23■□□□□ 0.67
Smarcc1P97496 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.23■□□□□ 0.67
Smarcc1P97496 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smarcc1P97496 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarcc1P97496 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Smarcc1P97496 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Gm11543-201ENSMUST00000120758 370 ntBASIC19.22■□□□□ 0.67
Smarcc1P97496 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.22■□□□□ 0.67
Smarcc1P97496 Gm9824-201ENSMUST00000178707 561 ntBASIC19.22■□□□□ 0.67
Smarcc1P97496 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smarcc1P97496 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc1P97496 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Gm13823-201ENSMUST00000119930 345 ntBASIC19.21■□□□□ 0.67
Smarcc1P97496 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Gm18737-201ENSMUST00000173594 937 ntBASIC19.21■□□□□ 0.67
Smarcc1P97496 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smarcc1P97496 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.21■□□□□ 0.67
Smarcc1P97496 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc1P97496 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Smarcc1P97496 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcc1P97496 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcc1P97496 Gm8410-201ENSMUST00000117225 605 ntBASIC19.2■□□□□ 0.66
Smarcc1P97496 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcc1P97496 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Smarcc1P97496 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.2■□□□□ 0.66
Smarcc1P97496 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smarcc1P97496 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.2■□□□□ 0.66
Smarcc1P97496 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcc1P97496 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Smarcc1P97496 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcc1P97496 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc1P97496 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.19■□□□□ 0.66
Smarcc1P97496 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Smarcc1P97496 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms