Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rpph1-201ENSMUST00000175096 319 ntBASIC15.77■□□□□ 0.12
Ybx1P62960 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.77■□□□□ 0.12
Ybx1P62960 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.77■□□□□ 0.12
Ybx1P62960 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ybx1P62960 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ybx1P62960 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ybx1P62960 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ybx1P62960 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.77■□□□□ 0.11
Ybx1P62960 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ybx1P62960 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Ybx1P62960 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ybx1P62960 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.76■□□□□ 0.11
Ybx1P62960 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.76■□□□□ 0.11
Ybx1P62960 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.76■□□□□ 0.11
Ybx1P62960 Gm16198-201ENSMUST00000118766 670 ntBASIC15.76■□□□□ 0.11
Ybx1P62960 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.76■□□□□ 0.11
Ybx1P62960 Gm18889-201ENSMUST00000174284 929 ntBASIC15.76■□□□□ 0.11
Ybx1P62960 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.76■□□□□ 0.11
Ybx1P62960 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ybx1P62960 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.76■□□□□ 0.11
Ybx1P62960 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.76■□□□□ 0.11
Ybx1P62960 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.76■□□□□ 0.11
Ybx1P62960 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ybx1P62960 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ybx1P62960 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ybx1P62960 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ybx1P62960 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.75■□□□□ 0.11
Ybx1P62960 Gm25948-201ENSMUST00000175334 112 ntBASIC15.75■□□□□ 0.11
Ybx1P62960 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.75■□□□□ 0.11
Ybx1P62960 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.75■□□□□ 0.11
Ybx1P62960 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ybx1P62960 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ybx1P62960 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ybx1P62960 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Ybx1P62960 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.75■□□□□ 0.11
Ybx1P62960 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ybx1P62960 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ybx1P62960 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ybx1P62960 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.74■□□□□ 0.11
Ybx1P62960 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.74■□□□□ 0.11
Ybx1P62960 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.74■□□□□ 0.11
Ybx1P62960 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.74■□□□□ 0.11
Ybx1P62960 Gm20949-201ENSMUST00000206478 952 ntBASIC15.74■□□□□ 0.11
Ybx1P62960 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Ybx1P62960 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.74■□□□□ 0.11
Ybx1P62960 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ybx1P62960 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ybx1P62960 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ybx1P62960 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ybx1P62960 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ybx1P62960 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ybx1P62960 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ybx1P62960 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms