Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Lsm5P62322 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.89□□□□□ -0.35
Lsm5P62322 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
Lsm5P62322 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.89□□□□□ -0.35
Lsm5P62322 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lsm5P62322 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Lsm5P62322 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Lsm5P62322 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Lsm5P62322 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.89□□□□□ -0.35
Lsm5P62322 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Lsm5P62322 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lsm5P62322 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Lsm5P62322 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lsm5P62322 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Lsm5P62322 Gm11539-201ENSMUST00000119837 557 ntBASIC12.88□□□□□ -0.35
Lsm5P62322 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.88□□□□□ -0.35
Lsm5P62322 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Trmt13-210ENSMUST00000198454 880 ntBASIC12.88□□□□□ -0.35
Lsm5P62322 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.88□□□□□ -0.35
Lsm5P62322 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.88□□□□□ -0.35
Lsm5P62322 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lsm5P62322 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lsm5P62322 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.88□□□□□ -0.35
Lsm5P62322 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lsm5P62322 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Lsm5P62322 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.88□□□□□ -0.35
Lsm5P62322 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Lsm5P62322 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm5P62322 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lsm5P62322 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm5P62322 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm5P62322 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm5P62322 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm5P62322 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lsm5P62322 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm5P62322 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.87□□□□□ -0.35
Lsm5P62322 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lsm5P62322 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm5P62322 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lsm5P62322 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm5P62322 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.86□□□□□ -0.35
Lsm5P62322 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Lsm5P62322 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.86□□□□□ -0.35
Lsm5P62322 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm5P62322 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm5P62322 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm5P62322 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms