Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Gm3436-201ENSMUST00000179930 840 ntBASIC19.3■□□□□ 0.68
Vps33bP59016 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC19.3■□□□□ 0.68
Vps33bP59016 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.3■□□□□ 0.68
Vps33bP59016 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vps33bP59016 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vps33bP59016 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vps33bP59016 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps33bP59016 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Vps33bP59016 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.29■□□□□ 0.68
Vps33bP59016 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Vps33bP59016 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.29■□□□□ 0.68
Vps33bP59016 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vps33bP59016 Gm42612-201ENSMUST00000197986 623 ntBASIC19.29■□□□□ 0.68
Vps33bP59016 Gm43170-201ENSMUST00000199827 612 ntBASIC19.29■□□□□ 0.68
Vps33bP59016 Gm9908-201ENSMUST00000211534 448 ntBASIC19.29■□□□□ 0.68
Vps33bP59016 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.29■□□□□ 0.68
Vps33bP59016 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps33bP59016 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.28■□□□□ 0.68
Vps33bP59016 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Gm13829-201ENSMUST00000119600 138 ntBASIC19.28■□□□□ 0.68
Vps33bP59016 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.28■□□□□ 0.68
Vps33bP59016 Gm16476-201ENSMUST00000221544 139 ntBASIC19.28■□□□□ 0.68
Vps33bP59016 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Vps33bP59016 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps33bP59016 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Vps33bP59016 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.27■□□□□ 0.68
Vps33bP59016 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.27■□□□□ 0.68
Vps33bP59016 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Vps33bP59016 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.27■□□□□ 0.68
Vps33bP59016 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Vps33bP59016 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Vps33bP59016 Mir1897-201ENSMUST00000122581 272 ntBASIC19.27■□□□□ 0.68
Vps33bP59016 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Vps33bP59016 Gm5479-201ENSMUST00000160578 435 ntBASIC19.27■□□□□ 0.68
Vps33bP59016 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.27■□□□□ 0.68
Vps33bP59016 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 Gm9899-201ENSMUST00000065519 555 ntBASIC19.27■□□□□ 0.68
Vps33bP59016 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps33bP59016 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.27■□□□□ 0.67
Vps33bP59016 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps33bP59016 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps33bP59016 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.27■□□□□ 0.67
Vps33bP59016 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps33bP59016 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps33bP59016 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Vps33bP59016 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Vps33bP59016 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.26■□□□□ 0.67
Vps33bP59016 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.26■□□□□ 0.67
Vps33bP59016 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.26■□□□□ 0.67
Vps33bP59016 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.26■□□□□ 0.67
Vps33bP59016 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.26■□□□□ 0.67
Vps33bP59016 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps33bP59016 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms