Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt1P50431 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt1P50431 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt1P50431 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shmt1P50431 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Shmt1P50431 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.28■□□□□ 0.2
Shmt1P50431 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.28■□□□□ 0.2
Shmt1P50431 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Shmt1P50431 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Shmt1P50431 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.28■□□□□ 0.2
Shmt1P50431 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.28■□□□□ 0.2
Shmt1P50431 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Shmt1P50431 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shmt1P50431 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Shmt1P50431 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shmt1P50431 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.27■□□□□ 0.2
Shmt1P50431 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shmt1P50431 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Shmt1P50431 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shmt1P50431 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Shmt1P50431 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shmt1P50431 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.27■□□□□ 0.2
Shmt1P50431 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.27■□□□□ 0.2
Shmt1P50431 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.27■□□□□ 0.2
Shmt1P50431 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.27■□□□□ 0.2
Shmt1P50431 Gm25925-201ENSMUST00000158314 306 ntBASIC16.27■□□□□ 0.2
Shmt1P50431 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shmt1P50431 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.27■□□□□ 0.2
Shmt1P50431 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Shmt1P50431 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Shmt1P50431 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Shmt1P50431 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Shmt1P50431 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shmt1P50431 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Shmt1P50431 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Shmt1P50431 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.26■□□□□ 0.19
Shmt1P50431 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.26■□□□□ 0.19
Shmt1P50431 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Gm10499-201ENSMUST00000174094 934 ntBASIC16.26■□□□□ 0.19
Shmt1P50431 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Shmt1P50431 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shmt1P50431 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shmt1P50431 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shmt1P50431 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shmt1P50431 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shmt1P50431 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shmt1P50431 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Shmt1P50431 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shmt1P50431 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.25■□□□□ 0.19
Shmt1P50431 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shmt1P50431 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shmt1P50431 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms