Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SftpbP50405 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SftpbP50405 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Gm25406-201ENSMUST00000157599 105 ntBASIC15.81■□□□□ 0.12
SftpbP50405 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SftpbP50405 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Gm23634-201ENSMUST00000175071 91 ntBASIC15.81■□□□□ 0.12
SftpbP50405 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SftpbP50405 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.81■□□□□ 0.12
SftpbP50405 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.81■□□□□ 0.12
SftpbP50405 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.81■□□□□ 0.12
SftpbP50405 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SftpbP50405 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Gm7367-201ENSMUST00000057611 492 ntBASIC15.81■□□□□ 0.12
SftpbP50405 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SftpbP50405 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SftpbP50405 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SftpbP50405 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.8■□□□□ 0.12
SftpbP50405 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.8■□□□□ 0.12
SftpbP50405 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.8■□□□□ 0.12
SftpbP50405 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SftpbP50405 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SftpbP50405 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.79■□□□□ 0.12
SftpbP50405 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SftpbP50405 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SftpbP50405 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.79■□□□□ 0.12
SftpbP50405 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SftpbP50405 Gm13312-201ENSMUST00000119631 718 ntBASIC15.79■□□□□ 0.12
SftpbP50405 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.79■□□□□ 0.12
SftpbP50405 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.79■□□□□ 0.12
SftpbP50405 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SftpbP50405 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.79■□□□□ 0.12
SftpbP50405 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SftpbP50405 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Grk6-207ENSMUST00000225925 2769 ntBASIC15.79■□□□□ 0.12
SftpbP50405 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.79■□□□□ 0.12
SftpbP50405 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SftpbP50405 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SftpbP50405 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.78■□□□□ 0.12
SftpbP50405 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.78■□□□□ 0.12
SftpbP50405 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.78■□□□□ 0.12
SftpbP50405 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.78■□□□□ 0.12
SftpbP50405 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SftpbP50405 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SftpbP50405 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SftpbP50405 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SftpbP50405 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms