Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nedd4P46935 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Nedd4P46935 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Gm15653-201ENSMUST00000119247 907 ntBASIC18.47■□□□□ 0.55
Nedd4P46935 Gm23984-201ENSMUST00000157139 203 ntBASIC18.47■□□□□ 0.55
Nedd4P46935 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Gm44719-201ENSMUST00000206404 149 ntBASIC18.47■□□□□ 0.55
Nedd4P46935 Gm45384-201ENSMUST00000210451 277 ntBASIC18.47■□□□□ 0.55
Nedd4P46935 Gm6180-201ENSMUST00000065243 498 ntBASIC18.47■□□□□ 0.55
Nedd4P46935 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nedd4P46935 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Nedd4P46935 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.47■□□□□ 0.55
Nedd4P46935 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nedd4P46935 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nedd4P46935 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.46■□□□□ 0.55
Nedd4P46935 Gm11478-201ENSMUST00000117851 599 ntBASIC18.46■□□□□ 0.55
Nedd4P46935 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.46■□□□□ 0.55
Nedd4P46935 Gm16026-204ENSMUST00000162652 683 ntBASIC18.46■□□□□ 0.55
Nedd4P46935 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Gm27533-201ENSMUST00000183800 152 ntBASIC18.46■□□□□ 0.55
Nedd4P46935 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.46■□□□□ 0.55
Nedd4P46935 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.46■□□□□ 0.55
Nedd4P46935 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nedd4P46935 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nedd4P46935 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.46■□□□□ 0.55
Nedd4P46935 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nedd4P46935 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nedd4P46935 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nedd4P46935 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nedd4P46935 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.45■□□□□ 0.54
Nedd4P46935 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nedd4P46935 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.45■□□□□ 0.54
Nedd4P46935 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.45■□□□□ 0.54
Nedd4P46935 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.45■□□□□ 0.54
Nedd4P46935 Gm15483-201ENSMUST00000120338 456 ntBASIC18.45■□□□□ 0.54
Nedd4P46935 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.45■□□□□ 0.54
Nedd4P46935 Gm24694-201ENSMUST00000180054 110 ntBASIC18.45■□□□□ 0.54
Nedd4P46935 Gm27663-201ENSMUST00000184839 110 ntBASIC18.45■□□□□ 0.54
Nedd4P46935 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Gm9899-201ENSMUST00000065519 555 ntBASIC18.45■□□□□ 0.54
Nedd4P46935 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.45■□□□□ 0.54
Nedd4P46935 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nedd4P46935 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nedd4P46935 Gm13216-201ENSMUST00000117145 591 ntBASIC18.44■□□□□ 0.54
Nedd4P46935 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.44■□□□□ 0.54
Nedd4P46935 Gm12138-201ENSMUST00000122180 951 ntBASIC18.44■□□□□ 0.54
Nedd4P46935 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nedd4P46935 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.44■□□□□ 0.54
Nedd4P46935 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nedd4P46935 Gm18062-201ENSMUST00000208020 547 ntBASIC18.44■□□□□ 0.54
Nedd4P46935 Gm18055-201ENSMUST00000208254 547 ntBASIC18.44■□□□□ 0.54
Nedd4P46935 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nedd4P46935 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nedd4P46935 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms