Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.13□□□□□ -0.15
Nkx2-2P42586 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.13□□□□□ -0.15
Nkx2-2P42586 Gm37153-201ENSMUST00000193637 231 ntBASIC14.13□□□□□ -0.15
Nkx2-2P42586 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.13□□□□□ -0.15
Nkx2-2P42586 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-2P42586 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Gm11764-201ENSMUST00000120221 623 ntBASIC14.12□□□□□ -0.15
Nkx2-2P42586 Gm15173-201ENSMUST00000122049 433 ntBASIC14.12□□□□□ -0.15
Nkx2-2P42586 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Gm6550-201ENSMUST00000187574 993 ntBASIC14.12□□□□□ -0.15
Nkx2-2P42586 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.12□□□□□ -0.15
Nkx2-2P42586 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-2P42586 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx2-2P42586 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Gm10060-201ENSMUST00000212002 111 ntBASIC14.11□□□□□ -0.15
Nkx2-2P42586 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx2-2P42586 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-2P42586 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.1□□□□□ -0.15
Nkx2-2P42586 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.1□□□□□ -0.15
Nkx2-2P42586 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-2P42586 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms