Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Timp3P39876 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.64□□□□□ -0.39
Timp3P39876 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Timp3P39876 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.64□□□□□ -0.39
Timp3P39876 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.64□□□□□ -0.39
Timp3P39876 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.64□□□□□ -0.39
Timp3P39876 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.64□□□□□ -0.39
Timp3P39876 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Timp3P39876 Gm8000-201ENSMUST00000188378 592 ntBASIC12.64□□□□□ -0.39
Timp3P39876 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.64□□□□□ -0.39
Timp3P39876 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.64□□□□□ -0.39
Timp3P39876 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.64□□□□□ -0.39
Timp3P39876 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Psmb5-202ENSMUST00000227257 622 ntBASIC12.64□□□□□ -0.39
Timp3P39876 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Timp3P39876 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timp3P39876 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.63□□□□□ -0.39
Timp3P39876 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.63□□□□□ -0.39
Timp3P39876 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.63□□□□□ -0.39
Timp3P39876 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm8825-201ENSMUST00000182565 998 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm4518-201ENSMUST00000182638 718 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Gm37935-201ENSMUST00000192012 982 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Gm5364-201ENSMUST00000216789 889 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Timp3P39876 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.63□□□□□ -0.39
Timp3P39876 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.63□□□□□ -0.39
Timp3P39876 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Timp3P39876 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Timp3P39876 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Timp3P39876 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Timp3P39876 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Timp3P39876 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Timp3P39876 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.62□□□□□ -0.39
Timp3P39876 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Timp3P39876 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.62□□□□□ -0.39
Timp3P39876 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.62□□□□□ -0.39
Timp3P39876 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.62□□□□□ -0.39
Timp3P39876 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Timp3P39876 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Timp3P39876 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.62□□□□□ -0.39
Timp3P39876 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms