Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.32□□□□□ -0.12
Nedd8P29595 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nedd8P29595 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Nedd8P29595 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nedd8P29595 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Nedd8P29595 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.32□□□□□ -0.12
Nedd8P29595 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd8P29595 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nedd8P29595 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.31□□□□□ -0.12
Nedd8P29595 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.31□□□□□ -0.12
Nedd8P29595 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.31□□□□□ -0.12
Nedd8P29595 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nedd8P29595 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nedd8P29595 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nedd8P29595 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nedd8P29595 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nedd8P29595 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.3□□□□□ -0.12
Nedd8P29595 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.3□□□□□ -0.12
Nedd8P29595 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.3□□□□□ -0.12
Nedd8P29595 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.3□□□□□ -0.12
Nedd8P29595 Gm18115-201ENSMUST00000221209 621 ntBASIC14.3□□□□□ -0.12
Nedd8P29595 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nedd8P29595 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nedd8P29595 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nedd8P29595 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nedd8P29595 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.29□□□□□ -0.12
Nedd8P29595 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.29□□□□□ -0.12
Nedd8P29595 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nedd8P29595 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.29□□□□□ -0.12
Nedd8P29595 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nedd8P29595 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nedd8P29595 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nedd8P29595 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nedd8P29595 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms