Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Vcam1P29533 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vcam1P29533 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcam1P29533 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vcam1P29533 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Vcam1P29533 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Mir449b-201ENSMUST00000104833 80 ntBASIC17.66■□□□□ 0.42
Vcam1P29533 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.66■□□□□ 0.42
Vcam1P29533 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.66■□□□□ 0.42
Vcam1P29533 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.66■□□□□ 0.42
Vcam1P29533 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
Vcam1P29533 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.66■□□□□ 0.42
Vcam1P29533 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Vcam1P29533 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vcam1P29533 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcam1P29533 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Vcam1P29533 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vcam1P29533 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.65■□□□□ 0.42
Vcam1P29533 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vcam1P29533 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.65■□□□□ 0.42
Vcam1P29533 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Vcam1P29533 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Vcam1P29533 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vcam1P29533 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.65■□□□□ 0.42
Vcam1P29533 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.65■□□□□ 0.42
Vcam1P29533 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Vcam1P29533 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcam1P29533 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.64■□□□□ 0.41
Vcam1P29533 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.64■□□□□ 0.41
Vcam1P29533 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.64■□□□□ 0.41
Vcam1P29533 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcam1P29533 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vcam1P29533 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.64■□□□□ 0.41
Vcam1P29533 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vcam1P29533 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vcam1P29533 Gm25287-201ENSMUST00000103846 110 ntBASIC17.63■□□□□ 0.41
Vcam1P29533 Gm22918-201ENSMUST00000103855 110 ntBASIC17.63■□□□□ 0.41
Vcam1P29533 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vcam1P29533 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vcam1P29533 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.63■□□□□ 0.41
Vcam1P29533 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.63■□□□□ 0.41
Vcam1P29533 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vcam1P29533 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcam1P29533 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vcam1P29533 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.63■□□□□ 0.41
Vcam1P29533 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms