Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tnfrsf1bP25119 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfrsf1bP25119 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.28□□□□□ -0.12
Tnfrsf1bP25119 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfrsf1bP25119 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf1bP25119 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Gm14722-201ENSMUST00000118943 689 ntBASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Gm12350-201ENSMUST00000121208 462 ntBASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf1bP25119 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Sybu-209ENSMUST00000228639 4113 ntBASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf1bP25119 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Gm13036-201ENSMUST00000117799 748 ntBASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf1bP25119 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms