Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cntn1P12960 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.79□□□□□ -0.04
Cntn1P12960 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.79□□□□□ -0.04
Cntn1P12960 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.79□□□□□ -0.04
Cntn1P12960 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Gm18489-201ENSMUST00000172565 551 ntBASIC14.79□□□□□ -0.04
Cntn1P12960 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.79□□□□□ -0.04
Cntn1P12960 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.79□□□□□ -0.04
Cntn1P12960 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cntn1P12960 Gm7787-201ENSMUST00000216858 688 ntBASIC14.79□□□□□ -0.04
Cntn1P12960 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.79□□□□□ -0.04
Cntn1P12960 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.79□□□□□ -0.04
Cntn1P12960 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cntn1P12960 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cntn1P12960 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.78□□□□□ -0.04
Cntn1P12960 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.78□□□□□ -0.04
Cntn1P12960 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cntn1P12960 Gm14494-201ENSMUST00000118786 435 ntBASIC14.78□□□□□ -0.04
Cntn1P12960 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.78□□□□□ -0.04
Cntn1P12960 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cntn1P12960 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.78□□□□□ -0.04
Cntn1P12960 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cntn1P12960 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cntn1P12960 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.78□□□□□ -0.04
Cntn1P12960 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cntn1P12960 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.78□□□□□ -0.04
Cntn1P12960 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cntn1P12960 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cntn1P12960 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cntn1P12960 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cntn1P12960 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Cntn1P12960 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cntn1P12960 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cntn1P12960 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cntn1P12960 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.77□□□□□ -0.05
Cntn1P12960 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.77□□□□□ -0.05
Cntn1P12960 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.77□□□□□ -0.05
Cntn1P12960 Gm27300-201ENSMUST00000184085 97 ntBASIC14.77□□□□□ -0.05
Cntn1P12960 Gm27335-201ENSMUST00000184758 97 ntBASIC14.77□□□□□ -0.05
Cntn1P12960 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.77□□□□□ -0.05
Cntn1P12960 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cntn1P12960 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cntn1P12960 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.76□□□□□ -0.05
Cntn1P12960 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.76□□□□□ -0.05
Cntn1P12960 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.76□□□□□ -0.05
Cntn1P12960 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cntn1P12960 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cntn1P12960 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms