Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a2P08122 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col4a2P08122 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a2P08122 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.2□□□□□ -0.14
Col4a2P08122 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.2□□□□□ -0.14
Col4a2P08122 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
Col4a2P08122 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a2P08122 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.19□□□□□ -0.14
Col4a2P08122 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col4a2P08122 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.19□□□□□ -0.14
Col4a2P08122 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.19□□□□□ -0.14
Col4a2P08122 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Col4a2P08122 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a2P08122 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.19□□□□□ -0.14
Col4a2P08122 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a2P08122 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.18□□□□□ -0.14
Col4a2P08122 Gm9824-201ENSMUST00000178707 561 ntBASIC14.18□□□□□ -0.14
Col4a2P08122 Gm25144-201ENSMUST00000179561 110 ntBASIC14.18□□□□□ -0.14
Col4a2P08122 Gm25352-201ENSMUST00000179815 110 ntBASIC14.18□□□□□ -0.14
Col4a2P08122 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col4a2P08122 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.18□□□□□ -0.14
Col4a2P08122 Gm43767-201ENSMUST00000198933 381 ntBASIC14.18□□□□□ -0.14
Col4a2P08122 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col4a2P08122 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col4a2P08122 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.18□□□□□ -0.14
Col4a2P08122 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col4a2P08122 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col4a2P08122 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Prob1-201ENSMUST00000097619 3021 ntBASIC14.18□□□□□ -0.14
Col4a2P08122 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.18□□□□□ -0.14
Col4a2P08122 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a2P08122 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.17□□□□□ -0.14
Col4a2P08122 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col4a2P08122 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col4a2P08122 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.17□□□□□ -0.14
Col4a2P08122 Grk6-207ENSMUST00000225925 2769 ntBASIC14.17□□□□□ -0.14
Col4a2P08122 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col4a2P08122 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Gm13453-201ENSMUST00000118708 357 ntBASIC14.17□□□□□ -0.14
Col4a2P08122 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
Col4a2P08122 Mir8102-201ENSMUST00000184148 139 ntBASIC14.17□□□□□ -0.14
Col4a2P08122 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.17□□□□□ -0.14
Col4a2P08122 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.17□□□□□ -0.14
Col4a2P08122 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a2P08122 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a2P08122 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms