Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.74■□□□□ 0.43
Sema3fO88632 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sema3fO88632 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sema3fO88632 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sema3fO88632 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sema3fO88632 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sema3fO88632 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sema3fO88632 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sema3fO88632 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sema3fO88632 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sema3fO88632 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Sema3fO88632 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sema3fO88632 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.73■□□□□ 0.43
Sema3fO88632 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.73■□□□□ 0.43
Sema3fO88632 Gm45612-201ENSMUST00000211320 160 ntBASIC17.73■□□□□ 0.43
Sema3fO88632 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.73■□□□□ 0.43
Sema3fO88632 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.73■□□□□ 0.43
Sema3fO88632 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.73■□□□□ 0.43
Sema3fO88632 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sema3fO88632 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.73■□□□□ 0.43
Sema3fO88632 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sema3fO88632 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sema3fO88632 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sema3fO88632 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.72■□□□□ 0.43
Sema3fO88632 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.72■□□□□ 0.43
Sema3fO88632 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sema3fO88632 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Gm9385-201ENSMUST00000117563 472 ntBASIC17.72■□□□□ 0.43
Sema3fO88632 Gm16198-201ENSMUST00000118766 670 ntBASIC17.72■□□□□ 0.43
Sema3fO88632 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.72■□□□□ 0.43
Sema3fO88632 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sema3fO88632 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.72■□□□□ 0.43
Sema3fO88632 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.72■□□□□ 0.43
Sema3fO88632 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sema3fO88632 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sema3fO88632 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.72■□□□□ 0.43
Sema3fO88632 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.72■□□□□ 0.43
Sema3fO88632 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.72■□□□□ 0.43
Sema3fO88632 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3fO88632 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.72■□□□□ 0.43
Sema3fO88632 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Sema3fO88632 Gm27301-201ENSMUST00000184012 127 ntBASIC17.71■□□□□ 0.43
Sema3fO88632 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.71■□□□□ 0.43
Sema3fO88632 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.71■□□□□ 0.43
Sema3fO88632 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3fO88632 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms