Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.21■□□□□ 0.03
Pdlim1O70400 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.21■□□□□ 0.03
Pdlim1O70400 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim1O70400 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.21■□□□□ 0.03
Pdlim1O70400 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim1O70400 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim1O70400 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim1O70400 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim1O70400 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim1O70400 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdlim1O70400 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.2■□□□□ 0.02
Pdlim1O70400 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim1O70400 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.2■□□□□ 0.02
Pdlim1O70400 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim1O70400 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdlim1O70400 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdlim1O70400 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim1O70400 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim1O70400 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim1O70400 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim1O70400 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.19■□□□□ 0.02
Pdlim1O70400 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.19■□□□□ 0.02
Pdlim1O70400 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.19■□□□□ 0.02
Pdlim1O70400 Gm45167-201ENSMUST00000208007 322 ntBASIC15.19■□□□□ 0.02
Pdlim1O70400 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim1O70400 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Pdlim1O70400 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim1O70400 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pdlim1O70400 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim1O70400 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim1O70400 Gm27628-201ENSMUST00000184911 107 ntBASIC15.18■□□□□ 0.02
Pdlim1O70400 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim1O70400 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms