Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Per2O54943 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Per2O54943 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Per2O54943 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Per2O54943 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Per2O54943 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Per2O54943 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Per2O54943 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.09■□□□□ 0.17
Per2O54943 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Per2O54943 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Gm8097-201ENSMUST00000117903 829 ntBASIC16.09■□□□□ 0.17
Per2O54943 Ank2-226ENSMUST00000189368 339 ntBASIC16.09■□□□□ 0.17
Per2O54943 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Per2O54943 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Per2O54943 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Per2O54943 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Per2O54943 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.09■□□□□ 0.17
Per2O54943 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Per2O54943 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Per2O54943 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Per2O54943 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Per2O54943 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Per2O54943 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Per2O54943 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Per2O54943 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Per2O54943 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.07■□□□□ 0.16
Per2O54943 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.07■□□□□ 0.16
Per2O54943 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.07■□□□□ 0.16
Per2O54943 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.07■□□□□ 0.16
Per2O54943 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.07■□□□□ 0.16
Per2O54943 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Per2O54943 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Per2O54943 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Per2O54943 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Per2O54943 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Per2O54943 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Per2O54943 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.06■□□□□ 0.16
Per2O54943 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms