Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2b3O09039 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2b3O09039 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.73□□□□□ -0.21
Sh2b3O09039 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2b3O09039 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2b3O09039 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2b3O09039 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2b3O09039 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2b3O09039 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sh2b3O09039 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Gm13036-201ENSMUST00000117799 748 ntBASIC13.72□□□□□ -0.21
Sh2b3O09039 Gm14140-201ENSMUST00000119999 995 ntBASIC13.72□□□□□ -0.21
Sh2b3O09039 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sh2b3O09039 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sh2b3O09039 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2b3O09039 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sh2b3O09039 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.71□□□□□ -0.21
Sh2b3O09039 Gm6736-201ENSMUST00000166583 948 ntBASIC13.71□□□□□ -0.21
Sh2b3O09039 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Sh2b3O09039 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sh2b3O09039 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sh2b3O09039 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2b3O09039 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh2b3O09039 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh2b3O09039 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Sh2b3O09039 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh2b3O09039 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh2b3O09039 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.71□□□□□ -0.22
Sh2b3O09039 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.7□□□□□ -0.22
Sh2b3O09039 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.7□□□□□ -0.22
Sh2b3O09039 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Sh2b3O09039 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh2b3O09039 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.7□□□□□ -0.22
Sh2b3O09039 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.7□□□□□ -0.22
Sh2b3O09039 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.7□□□□□ -0.22
Sh2b3O09039 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh2b3O09039 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2b3O09039 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2b3O09039 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2b3O09039 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2b3O09039 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2b3O09039 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2b3O09039 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms