Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.49■□□□□ 0.55
NpcdF8VQB8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Gm6415-201ENSMUST00000118488 348 ntBASIC18.49■□□□□ 0.55
NpcdF8VQB8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Gm28631-201ENSMUST00000190740 334 ntBASIC18.49■□□□□ 0.55
NpcdF8VQB8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.48■□□□□ 0.55
NpcdF8VQB8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.48■□□□□ 0.55
NpcdF8VQB8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.48■□□□□ 0.55
NpcdF8VQB8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NpcdF8VQB8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Gm12490-201ENSMUST00000120255 560 ntBASIC18.47■□□□□ 0.55
NpcdF8VQB8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Gm18737-201ENSMUST00000173594 937 ntBASIC18.47■□□□□ 0.55
NpcdF8VQB8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.47■□□□□ 0.55
NpcdF8VQB8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NpcdF8VQB8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.46■□□□□ 0.55
NpcdF8VQB8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NpcdF8VQB8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NpcdF8VQB8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NpcdF8VQB8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NpcdF8VQB8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NpcdF8VQB8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NpcdF8VQB8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms