Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.07■□□□□ 0
Chd3B1AR17 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.07■□□□□ 0
Chd3B1AR17 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd3B1AR17 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd3B1AR17 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.07■□□□□ 0
Chd3B1AR17 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd3B1AR17 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd3B1AR17 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd3B1AR17 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd3B1AR17 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd3B1AR17 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.07■□□□□ 0
Chd3B1AR17 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Chd3B1AR17 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.06■□□□□ 0
Chd3B1AR17 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.06■□□□□ 0
Chd3B1AR17 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chd3B1AR17 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.06■□□□□ 0
Chd3B1AR17 Gm2213-201ENSMUST00000197485 688 ntBASIC15.06■□□□□ 0
Chd3B1AR17 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chd3B1AR17 Dancr-204ENSMUST00000132389 2347 ntBASIC15.06■□□□□ 0
Chd3B1AR17 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.06■□□□□ 0
Chd3B1AR17 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd3B1AR17 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Chd3B1AR17 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.05■□□□□ 0
Chd3B1AR17 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd3B1AR17 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd3B1AR17 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Chd3B1AR17 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd3B1AR17 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd3B1AR17 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.05■□□□□ 0
Chd3B1AR17 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.05■□□□□ 0
Chd3B1AR17 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.05■□□□□ 0
Chd3B1AR17 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd3B1AR17 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Chd3B1AR17 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd3B1AR17 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chd3B1AR17 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd3B1AR17 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.05■□□□□ -0
Chd3B1AR17 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd3B1AR17 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chd3B1AR17 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd3B1AR17 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.05■□□□□ -0
Chd3B1AR17 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd3B1AR17 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.05■□□□□ -0
Chd3B1AR17 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd3B1AR17 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd3B1AR17 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.05■□□□□ -0
Chd3B1AR17 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd3B1AR17 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.05■□□□□ -0
Chd3B1AR17 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Chd3B1AR17 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chd3B1AR17 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chd3B1AR17 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Chd3B1AR17 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.04■□□□□ -0
Chd3B1AR17 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.04■□□□□ -0
Chd3B1AR17 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Thap2-203ENSMUST00000218989 527 ntBASIC15.04■□□□□ -0
Chd3B1AR17 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.04■□□□□ -0
Chd3B1AR17 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.04■□□□□ -0
Chd3B1AR17 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd3B1AR17 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.04■□□□□ -0
Chd3B1AR17 Gm27397-201ENSMUST00000184997 107 ntBASIC15.04■□□□□ -0
Chd3B1AR17 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.04■□□□□ -0
Chd3B1AR17 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.04■□□□□ -0
Chd3B1AR17 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd3B1AR17 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.04■□□□□ -0
Chd3B1AR17 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd3B1AR17 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.04■□□□□ -0
Chd3B1AR17 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd3B1AR17 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chd3B1AR17 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd3B1AR17 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chd3B1AR17 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms