Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc112A0AUP1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc112A0AUP1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Gm19164-201ENSMUST00000210667 640 ntBASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc112A0AUP1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms